PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_3FD608E1A.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Dof
Protein Properties Length: 130aa    MW: 13798 Da    PI: 4.9908
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_3FD608E1A.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof44.82.7e-14106130529
                 zf-Dof   5 alkcprCdstntkfCyynnyslsqP 29 
                             l+cprC+stntkfCy+nnysl+qP
  Traes_3AL_3FD608E1A.1 106 GLNCPRCESTNTKFCYFNNYSLTQP 130
                            579*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-1587130IPR003851Zinc finger, Dof-type
PfamPF027014.0E-11107130IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MIFLPAFLDS SDFWNTDHNQ LQLQQIGTST HSTTTSSPDG PGDGGCNNNN PKGFMATTGA  60
DYDVAGGGDD GCGGAGDGDC SRGRNNKSIS MSERARLARL PHPVPGLNCP RCESTNTKFC  120
YFNNYSLTQP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014753866.13e-28PREDICTED: dof zinc finger protein DOF3.2-like
TrEMBLM8AIU49e-90M8AIU4_TRIUA; Dof zinc finger protein DOF3.6
TrEMBLW5CC665e-93W5CC66_WHEAT; Uncharacterized protein
STRINGMLOC_69454.16e-55(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.21e-17OBF-binding protein 3
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]